The detailed information of tRNA gene sequence


Sequence ID>WENV170763957
Genome IDLWDU01025677
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 772
End posion on genome 860
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtgatattat
tRNA gene sequence 
AGAGAGGTGGCCGAGCGGTCGAAGGCGCACGCTTGGAAAGCGTGTATACACCAAAAGTGT
ATCGAGGGTTCGAATCCCTTCCTCTCTGCat
Downstream region at tRNA end position 
gcaattataa
Secondary structure (Cloverleaf model)
>WENV170763957	Ser	GGA
                   t      GCat gcaattataa
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACACCAAAAGTGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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