The detailed information of tRNA gene sequence


Sequence ID>WENV170763960
Genome IDLWDU01025750
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1268
End posion on genome 1345
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgacgggcc
tRNA gene sequence 
AGCGGGTTGGAGTAGCCAGGTTATCTCGTCGGGCTCATAACCCGGAGACCGATCGTTCAA
ATCGATCACCCGCTACCA
Downstream region at tRNA end position 
ttgaatcgct
Secondary structure (Cloverleaf model)
>WENV170763960	Met	CAT
                   c      ACCA ttgaatcgct
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C T A G C     A
    C C G A        G      | | | | |     A
  A         T G A G       G A T C G     C
  G           | | |                 T T
  G         T C T C
    T T A          G     AGACC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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