The detailed information of tRNA gene sequence


Sequence ID>WENV170764004
Genome IDLWDU01027072
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1661
End posion on genome 1572
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgatattgtt
tRNA gene sequence 
GGAGAGTTGGGTGAGTGGCTGAAACCAGCTGGTTGCTAACTAGCCGTAGTTTAACGACTA
CCGAGAGTTCGAATCTCTCACTCTCCGCCA
Downstream region at tRNA end position 
ttaatataac
Secondary structure (Cloverleaf model)
>WENV170764004	Ser	GCT
                   t      GCCA ttaatataac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTAGTTTAACGACTACC
                    G - C
                    C - G
                    T - A
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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