The detailed information of tRNA gene sequence


Sequence ID>WENV170764050
Genome IDLWDU01028333
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 942
End posion on genome 1033
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttggttattt
tRNA gene sequence 
GGAAGAGTGGGTGAGCGGTTGAAACCAGTTGGTTGCTAACTAACCGTACGAGTAATATCG
TACCGAGAGTTCGAATCTCTCCTCTTCCGCCA
Downstream region at tRNA end position 
aagttaatta
Secondary structure (Cloverleaf model)
>WENV170764050	Ser	GCT
                   t      GCCA aagttaatta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    T       A A C C
      T G A        A     CGTACGAGTAATATCGTACC
                    G - C
                    T - A
                    T - A
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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