The detailed information of tRNA gene sequence


Sequence ID>WENV170764072
Genome IDLWDU01029383
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2528
End posion on genome 2440
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnnnnncc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGTGATAGACTCGAAATCTATTGTACGTTCTGCGTAC
CGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tcaaaactga
Secondary structure (Cloverleaf model)
>WENV170764072	Ser	CGA
                   c      GCCA tcaaaactga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G         | |                   T T
    T       A G G T
      T T A        G     TGTACGTTCTGCGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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