The detailed information of tRNA gene sequence


Sequence ID>WENV170764079
Genome IDLWDU01029633
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1084
End posion on genome 1159
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaatttttac
tRNA gene sequence 
AGGGGTGTAGCTCAATTGGCAGAGCACTGGTTTCCAAAACCAGCGGTTGCGGGTTCAAGT
CCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
tacagtccnn
Secondary structure (Cloverleaf model)
>WENV170764079	Trp	CCA
                   c      GCCA tacagtccnn
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      |   | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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