The detailed information of tRNA gene sequence


Sequence ID>WENV170764108
Genome IDLWDU01030384
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 411
End posion on genome 501
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgcctctgc
tRNA gene sequence 
GGAGGGGTGGCAGAGTGGTCGAATGCAACGGTCTTGAAAACCGTCGTGGGTTAATAGCCC
ACCGAGAGTTCGAATCTCTCCTCCTCCGCCA
Downstream region at tRNA end position 
ttttattagg
Secondary structure (Cloverleaf model)
>WENV170764108	Ser	TGA
                   c      GCCA ttttattagg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G A G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CGTGGGTTAATAGCCCACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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