The detailed information of tRNA gene sequence


Sequence ID>WENV170764134
Genome IDLWDU01031327
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1916
End posion on genome 2002
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cacaaccact
tRNA gene sequence 
GCAGACGTCGCATAGCCTGGTATTGCGCCGGATTTGAAATCCGGTGCCCTTTGTGGCACG
GGAGTTCGAATCTCTCCGTCTGCGCCT
Downstream region at tRNA end position 
aggaaggaag
Secondary structure (Cloverleaf model)
>WENV170764134	Ser	TGA
                   t      GCCT aggaaggaag
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        C      | + | | |     G
    C       T A C G       G G G A G     C
    T         | | |                 T T
    G       T T G C
      G T A        G     TGCCCTTTGTGGCAC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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