The detailed information of tRNA gene sequence


Sequence ID>WENV170764187
Genome IDLWDU01031814
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 60008
End posion on genome 60093
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccggaccgct
tRNA gene sequence 
GCCGAGATCGCATAGCCCGGTATTGCGGTGGATTCGAAATCCACTGTCCATTGGACGCGG
GGGTTCAAATCCCTCTCTCGGCGCCA
Downstream region at tRNA end position 
ttagaaatct
Secondary structure (Cloverleaf model)
>WENV170764187	Ser	CGA
                   t      GCCA ttagaaatct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T A C G       G G G G G     C
    C         | | |                 T T
    G       T T G C
      G T A        G     TGTCCATTGGACGC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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