The detailed information of tRNA gene sequence


Sequence ID>WENV170764222
Genome IDLWDU01031833
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 15516
End posion on genome 15601
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caatcctgct
tRNA gene sequence 
GCAGACGTCGCTTAGCCTGGTAGAGCGCCGGATTTGAAATCCGGTGTCCTTGTGACTCGG
GAGTTCAAATCTCTCCGTCTGCGCCA
Downstream region at tRNA end position 
ctttactcgt
Secondary structure (Cloverleaf model)
>WENV170764222	Ser	TGA
                   t      GCCA ctttactcgt
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        C      | + | | |     A
    C       T T C G       G G G A G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     TGTCCTTGTGACTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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