The detailed information of tRNA gene sequence


Sequence ID>WENV170764314
Genome IDLWDU01032000
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2567
End posion on genome 2641
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tttagattga
tRNA gene sequence 
GGGGAAGTAGTTTAATTTGGAAGAACGCTCGGTTTGCATCCGAGAGGCTGGGAGTTCAAA
TCTCCTCTTCTCCACtc
Downstream region at tRNA end position 
aaaacttaaa
Secondary structure (Cloverleaf model)
>WENV170764314	Ala	TGC
                   a      ACtc aaaacttaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T C C T C     A
      T A A        A      + | | | |     A
    T       T T T G       G G G A G     C
    T       + | | |                 T T
    G       G A A C
      G A A        G     AGGCT
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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