The detailed information of tRNA gene sequence


Sequence ID>WENV170764510
Genome IDLWDU01032536
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 19995
End posion on genome 19910
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcgcctgcgc
tRNA gene sequence 
GCCAGGATCGCCTAGTCCGGTAGGGCGGTGGTCTCGAAAACCACTGGGGTCTCCCCACGG
GGGTTCGAATCCCTCTCCTGGCGCCA
Downstream region at tRNA end position 
tgttactgga
Secondary structure (Cloverleaf model)
>WENV170764510	Ser	CGA
                   c      GCCA tgttactgga
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        C      | + | | |     G
    C       T C C G       G G G G G     C
    C       + | | |                 T T
    G       G G G C
      G T A        G     TGGGGTCTCCCCAC
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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