The detailed information of tRNA gene sequence


Sequence ID>WENV170764511
Genome IDLWDU01032536
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 15483
End posion on genome 15407
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccgcccgcgt
tRNA gene sequence 
GGGCCGGTAGATCAGTCTGGAAGATCGCCTCCTTGGCATGGAGGAGGGCGCGAGTTCAAA
TCTCGCCCGGTCCACCA
Downstream region at tRNA end position 
tgcgcggtat
Secondary structure (Cloverleaf model)
>WENV170764511	Ala	GGC
                   t      ACCA tgcgcggtat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        A      | | | | |     A
    C       C T A G       G C G A G     C
    T       | | | |                 T T
    G       G A T C
      G A A        G     AGGGC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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