The detailed information of tRNA gene sequence


Sequence ID>WENV170764591
Genome IDLWDU01032621
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 10591
End posion on genome 10505
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aaagattagt
tRNA gene sequence 
GCGGGGGTCGCATAGTCTGGCCAATTGCGTCGGGCTCAAAATCCGATCCTTAGTGGTACG
TGGGTTCGAATCCCTCCCCCCGCACCA
Downstream region at tRNA end position 
tgtttcacag
Secondary structure (Cloverleaf model)
>WENV170764591	Leu	CAA
                   t      ACCA tgtttcacag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      |   | | |     G
  T         T A C G       G T G G G     C
  G           | | |                 T T
  G         T T G C
    C C A A        G     TCCTTAGTGGTAC
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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