The detailed information of tRNA gene sequence


Sequence ID>WENV170764606
Genome IDLWDU01032679
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 11328
End posion on genome 11401
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctaaacttac
tRNA gene sequence 
GCGCGGGTGGCCAAGTCCGGTAAGGCAACGGGTTGCAATCCCGTCATTCGAGGGTTCAAA
TCCCTCTCCGCGCTtct
Downstream region at tRNA end position 
tatttaagac
Secondary structure (Cloverleaf model)
>WENV170764606	Cys	GCA
                   c      Ttct tatttaagac
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    C       A C C G       G A G G G     C
    C         | | |                 T T
    G       A G G C
      G T A        A     CATTC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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