The detailed information of tRNA gene sequence


Sequence ID>WENV170764654
Genome IDLWDU01033089
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 6755
End posion on genome 6830
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgattcatgT
tRNA gene sequence 
GGGTTCGTAGCCTAGCCTGGTAGGGCGATGGTCTCCAAAACCATCGATCGTCGGTTCAAA
TCCGATCGGGCCCATtt
Downstream region at tRNA end position 
tttatttttt
Secondary structure (Cloverleaf model)
>WENV170764654	Trp	CCA
                   T      ATtt tttatttttt
                     G - C
                     G - C
                     G - C
                     T + G
                     T + G
                     C - G
                     G - C          T A
                    T     T A G C C     A
      C G A        A      + | | | |     A
    C       T C C G       G T C G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     CGATC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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