The detailed information of tRNA gene sequence


Sequence ID>WENV170764661
Genome IDLWDU01033162
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 7062
End posion on genome 6977
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attgattttT
tRNA gene sequence 
GCAGAGGTCGCCTAGCCTGGTAGGGCGCGGGCCTTGAGAGCCTGTGTTCGCAAGAACGCG
GGGGTTCAAATCCCTCTCTCTGCGTta
Downstream region at tRNA end position 
tttattttcc
Secondary structure (Cloverleaf model)
>WENV170764661	Ser	TGA
                   T      GTta tttattttcc
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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