The detailed information of tRNA gene sequence


Sequence ID>WENV170764680
Genome IDLWDU01033245
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 3636
End posion on genome 3560
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aacaaagttT
tRNA gene sequence 
GGATCCGTCGTCTAGCTTGGTTTGGATGCCGCACTCACACTGCGGAGGTCAAGGGTTCAA
ATCCCTTCGGATCCATac
Downstream region at tRNA end position 
tcacctaggt
Secondary structure (Cloverleaf model)
>WENV170764680	Val	CAC
                   T      ATac tcacctaggt
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    T C G A        C      | | | | |     A
  T         T C T G       A A G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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