The detailed information of tRNA gene sequence


Sequence ID>WENV170764726
Genome IDLWDU01033294
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 219789
End posion on genome 219878
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caccccttac
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGCGTATAGGGTTAAACCTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cacaaccccg
Secondary structure (Cloverleaf model)
>WENV170764726	Ser	GCT
                   c      GCCA cacaaccccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTAAACCTATC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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