The detailed information of tRNA gene sequence


Sequence ID>WENV170764729
Genome IDLWDU01033295
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 69234
End posion on genome 69147
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcagtatac
tRNA gene sequence 
GGTGAGGTGTCCGAGCGGCCGAAGGAGCACGCCTGGAAAGTGTGTAAGCCGAAAGGCTTC
GAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
catactttca
Secondary structure (Cloverleaf model)
>WENV170764729	Ser	GGA
                   c      GCCA catactttca
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAAGCCGAAAGGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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