The detailed information of tRNA gene sequence


Sequence ID>WENV170764742
Genome IDLWDU01033302
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 66293
End posion on genome 66382
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cccctaccgc
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGTTGAATGCACTGGTCTTGAAAACCAGCGAGGATGAAAGTCCT
CCGAGAGTTCGAATCTCTCCTCCTCCGCCA
Downstream region at tRNA end position 
gtatccatgc
Secondary structure (Cloverleaf model)
>WENV170764742	Ser	TGA
                   c      GCCA gtatccatgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G A G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGAGGATGAAAGTCCTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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