The detailed information of tRNA gene sequence


Sequence ID>WENV170764750
Genome IDLWDU01033333
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 30510
End posion on genome 30421
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttagtttcac
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGCCAGATTGCTAATTTGGTGAACGGTTAACGCTG
TTCCGCGGGTTCAAATCCCGCTCTCTCCGCtt
Downstream region at tRNA end position 
ttccgaggcg
Secondary structure (Cloverleaf model)
>WENV170764750	Ser	GCT
                   c      GCtt ttccgaggcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G C G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAACGGTTAACGCTGTTCC
                    C - G
                    C - G
                    A - T
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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