The detailed information of tRNA gene sequence


Sequence ID>WENV170764755
Genome IDLWDU01033339
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 94514
End posion on genome 94425
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttagatgcac
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGCGAGATTGCTAATTTCGTGAACGGTTAACGCTG
TTCCGCGGGTTCGAATCCCGCTCTCTCCGCtt
Downstream region at tRNA end position 
tcaagaggcg
Secondary structure (Cloverleaf model)
>WENV170764755	Ser	GCT
                   c      GCtt tcaagaggcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G C G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAACGGTTAACGCTGTTCC
                    C - G
                    G - C
                    A - T
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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