The detailed information of tRNA gene sequence


Sequence ID>WENV170764778
Genome IDLWDU01033434
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 20317
End posion on genome 20390
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tagccaatgc
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGGAGAGCGTCTGGCTGGCAGCCAGAAGGTCAGGGGTTCGAGT
CCCCTATCCTCCACtt
Downstream region at tRNA end position 
tgctctgtgg
Secondary structure (Cloverleaf model)
>WENV170764778	Ala	GGC
                   c      ACtt tgctctgtgg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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