The detailed information of tRNA gene sequence


Sequence ID>WENV170764813
Genome IDLWDU01033618
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 68093
End posion on genome 68182
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaacttagtt
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTGAAGGCGCACGCTTGGAAAGTGTGTATACGAGCAATCGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttaattatca
Secondary structure (Cloverleaf model)
>WENV170764813	Ser	GGA
                   t      GCCA ttaattatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGAGCAATCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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