The detailed information of tRNA gene sequence


Sequence ID>WENV170764820
Genome IDLWDU01033619
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 3549
End posion on genome 3624
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ataattctct
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGTACGGCGCTCCAAACGCCGGGGTTGGGGGTTCGAGT
CCCTCCACTCCTGCCA
Downstream region at tRNA end position 
taaagtaaaa
Secondary structure (Cloverleaf model)
>WENV170764820	Trp	CCA
                   t      GCCA taaagtaaaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     GGGTT
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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