The detailed information of tRNA gene sequence


Sequence ID>WENV170764821
Genome IDLWDU01033619
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 62487
End posion on genome 62578
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catatttata
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGTTTAAACCAGTCGTTTGCTAAATGACCGTACGTGGAAACATG
TACCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
catttaataa
Secondary structure (Cloverleaf model)
>WENV170764821	Ser	GCT
                   a      GCCA catttaataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    T       A A C C
      T T A        A     CGTACGTGGAAACATGTACC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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