The detailed information of tRNA gene sequence


Sequence ID>WENV170764828
Genome IDLWDU01033632
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 39422
End posion on genome 39347
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaactctat
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGCTGAGGGTTCGAGT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
attagcttta
Secondary structure (Cloverleaf model)
>WENV170764828	Trp	CCA
                   t      GCCA attagcttta
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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