The detailed information of tRNA gene sequence


Sequence ID>WENV170764829
Genome IDLWDU01033633
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 15421
End posion on genome 15512
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atacgtctgt
tRNA gene sequence 
GGAAGAGTGGGTGAGAGGCTGAAACCAGTCGTTTGCTAAATGACCGTGCGAGGAAACTTG
TACCGAGGGTTCGAATCCCTCCTCTTCCGCCA
Downstream region at tRNA end position 
ttaaaacaat
Secondary structure (Cloverleaf model)
>WENV170764829	Ser	GCT
                   t      GCCA ttaaaacaat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTGCGAGGAAACTTGTACC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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