The detailed information of tRNA gene sequence


Sequence ID>WENV170764842
Genome IDLWDU01033659
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 4453
End posion on genome 4528
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtaagctact
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGATT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
aagtaaggat
Secondary structure (Cloverleaf model)
>WENV170764842	Trp	CCA
                   t      GCCA aagtaaggat
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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