The detailed information of tRNA gene sequence


Sequence ID>WENV170764870
Genome IDLWDU01033785
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 6722
End posion on genome 6630
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttataggttt
tRNA gene sequence 
GGAGAGGTGCGTGAGTTGGTTGAAACGAACGGGTTGCTAACTCGTCATAGCTAGCAATAG
CTATCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttaatttaac
Secondary structure (Cloverleaf model)
>WENV170764870	Ser	GCT
                   t      GCCA ttaatttaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G T G C       G T G G G     C
  G           | | |                 T T
  T         A A C G
    T G A          A     CATAGCTAGCAATAGCTATC
                    A - T
                    C - G
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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