The detailed information of tRNA gene sequence


Sequence ID>WENV170764920
Genome IDLWDU01034170
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2221
End posion on genome 2311
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaatggtgta
tRNA gene sequence 
GGAAGAGTGGGTGAGTTGGCTTAAACCAGCAGTTTGCTAAATTGCCGACGGAGCAATCCG
TCCAAGAGTTCGAATCTCTTCTCTTCCGCCA
Downstream region at tRNA end position 
aaaattacta
Secondary structure (Cloverleaf model)
>WENV170764920	Ser	GCT
                   a      GCCA aaaattacta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     T T C T C     A
    T T G A        G      | | | | |     G
  G         G T G G       A A G A G     C
  G           | | |                 T T
  C         A A C C
    T T A          A     CGACGGAGCAATCCGTCC
                    G - C
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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