The detailed information of tRNA gene sequence


Sequence ID>WENV170764944
Genome IDLWDU01034271
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 68685
End posion on genome 68772
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cacagaatac
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCCGAAGGAGCACGCCTGGAAAGTGTGTAAGCCGTAAGGCTTC
GAGAGTTCGAATCTCTCCCTCACCGCCA
Downstream region at tRNA end position 
gtaacccata
Secondary structure (Cloverleaf model)
>WENV170764944	Ser	GGA
                   c      GCCA gtaacccata
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G A G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAAGCCGTAAGGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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