The detailed information of tRNA gene sequence


Sequence ID>WENV170765022
Genome IDLWDU01034470
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1915
End posion on genome 1839
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttaaagaat
tRNA gene sequence 
AGGCCAGTAGCTCAATTTGGTAGAGCATCGGTCTCCAAAACCGGAGGTTGGGGGTTCAAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tagtttgacg
Secondary structure (Cloverleaf model)
>WENV170765022	Trp	CCA
                   t      GCCA tagtttgacg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     AGGTT
                    T + G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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