The detailed information of tRNA gene sequence


Sequence ID>WENV170765025
Genome IDLWDU01034531
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 7968
End posion on genome 7892
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttaaaataa
tRNA gene sequence 
GGCGGTGTAGCTCAGCTGGTTAGAGCATACGGTTCATATCCGTAGGGTCGGGAGTTCAAA
TCTCTCCACCGCTACCA
Downstream region at tRNA end position 
tgtaaaataa
Secondary structure (Cloverleaf model)
>WENV170765025	Met	CAT
                   a      ACCA tgtaaaataa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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