The detailed information of tRNA gene sequence


Sequence ID>WENV170765033
Genome IDLWDU01034812
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 125153
End posion on genome 125227
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attttgttat
tRNA gene sequence 
GGCGAGATAGCTCAGTTGGTTAGAGCGTCGGATTCATAACCCGGAGGTCGGGAGTTCAAA
TCTCCCTCTCGCTACtt
Downstream region at tRNA end position 
taaggggatt
Secondary structure (Cloverleaf model)
>WENV170765033	Met	CAT
                   t      ACtt taaggggatt
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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