The detailed information of tRNA gene sequence


Sequence ID>WENV170765041
Genome IDLWDU01034816
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 98305
End posion on genome 98215
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
actttgaaaa
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTTTAAGGCGCACGCTTGGAAAGCGTGTATACGCCAAAAGTGT
ATCGAGGGTTCGAATCCCTTCCTCTCTGCTA
Downstream region at tRNA end position 
agtataattt
Secondary structure (Cloverleaf model)
>WENV170765041	Ser	GGA
                   a      GCTA agtataattt
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATACGCCAAAAGTGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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