The detailed information of tRNA gene sequence


Sequence ID>WENV170765058
Genome IDLWDU01034824
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 39938
End posion on genome 40022
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatgagtaat
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTAATGGAGCAGATTGCTAATCTGTCGACGGGTAACTGTCGCC
GGGGTTCGAATCCCCGTCTCTCCGCat
Downstream region at tRNA end position 
agttaaaccc
Secondary structure (Cloverleaf model)
>WENV170765058	Ser	GCT
                   t      GCat agttaaaccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G C C C C     A
        G A        G      | | | | |     G
      T     G A C C       C G G G G     C
      G       | | |                 T T
      G     A T G G
        T A        A     CGACGGGTAACTGTCGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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