The detailed information of tRNA gene sequence


Sequence ID>WENV170765066
Genome IDLWDU01034851
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 85571
End posion on genome 85480
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttataatga
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTTTAAGGCGCGCGCTTGGAAAGCGTGTATTCTGAGAAATTGG
AATCGAGGGTTCGAATCCCTTCCTCTCTGCAA
Downstream region at tRNA end position 
ttttaacctc
Secondary structure (Cloverleaf model)
>WENV170765066	Ser	GGA
                   a      GCAA ttttaacctc
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATTCTGAGAAATTGGAATC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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