The detailed information of tRNA gene sequence


Sequence ID>WENV170765083
Genome IDLWDU01034865
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 31309
End posion on genome 31396
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cacttgattt
tRNA gene sequence 
GGAGAAATGGCAGAGTGGTCGAATGCGGCAGTCTTGAAAACTGTTGAGGGTCATACCTCC
GGGGGTTCGAATCCCTCTTTCTCCGCAA
Downstream region at tRNA end position 
aaaactccta
Secondary structure (Cloverleaf model)
>WENV170765083	Ser	TGA
                   t      GCAA aaaactccta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAGGGTCATACCTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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