The detailed information of tRNA gene sequence


Sequence ID>WENV170765090
Genome IDLWDU01034882
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 30707
End posion on genome 30613
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaattaaaat
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTCGAAGGCGCATGCTTGGAAAGCATGTATACGAAGTAATCCT
TTGTATCAAGGGTTCGAATCCCTTCCTCTCTGCAA
Downstream region at tRNA end position 
aaaatacatt
Secondary structure (Cloverleaf model)
>WENV170765090	Ser	GGA
                   t      GCAA aaaatacatt
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGAAGTAATCCTTTGTATC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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