The detailed information of tRNA gene sequence


Sequence ID>WENV170765127
Genome IDLWDU01035115
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 598
End posion on genome 508
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tggggatggc
tRNA gene sequence 
AGAGAGGTGGCCGAGCGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
attgcttgtc
Secondary structure (Cloverleaf model)
>WENV170765127	Ser	GGA
                   c      GCCA attgcttgtc
                     A   C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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