The detailed information of tRNA gene sequence


Sequence ID>WENV170765154
Genome IDLWDU01035177
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 18159
End posion on genome 18072
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgcgttaac
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACCTCACGGTATC
GAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gttaagttat
Secondary structure (Cloverleaf model)
>WENV170765154	Ser	GGA
                   c      GCCA gttaagttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TATACCTCACGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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