The detailed information of tRNA gene sequence


Sequence ID>WENV170765162
Genome IDLWDU01035230
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2622
End posion on genome 2546
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
agttacggtt
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGTCGTGAGTTCAAA
TCTCGCCATCCCGACCA
Downstream region at tRNA end position 
attgactcaa
Secondary structure (Cloverleaf model)
>WENV170765162	Pro	CGG
                   t      ACCA attgactcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     C G C T C     A
      C G A        A      | + | | |     A
    C       C T C G       G T G A G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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