The detailed information of tRNA gene sequence


Sequence ID>WENV170765167
Genome IDLWDU01035244
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 5445
End posion on genome 5369
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agagttacac
tRNA gene sequence 
GGAGCGGTAGTTCAGCTGGTTAGAATATCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAA
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
attccacctt
Secondary structure (Cloverleaf model)
>WENV170765167	Asp	GTC
                   c      GCCA attccacctt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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