The detailed information of tRNA gene sequence


Sequence ID>WENV170765176
Genome IDLWDU01035305
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 6872
End posion on genome 6781
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acttcttggt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCTCGTCTCGAAAACGAGTAAGCGGCGAATGTCG
CTTCATGGGTTCGAATCCCATCCTCTCCGCCA
Downstream region at tRNA end position 
gagaatgacc
Secondary structure (Cloverleaf model)
>WENV170765176	Ser	CGA
                   t      GCCA gagaatgacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TAAGCGGCGAATGTCGCTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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