The detailed information of tRNA gene sequence


Sequence ID>WENV170765182
Genome IDLWDU01035452
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 14683
End posion on genome 14593
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tacatttccc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGTTAAAAGCTC
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gaacgagtaa
Secondary structure (Cloverleaf model)
>WENV170765182	Ser	GCT
                   c      GCCA gaacgagtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGTTAAAAGCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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