The detailed information of tRNA gene sequence


Sequence ID>WENV170765189
Genome IDLWDU01035497
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 30411
End posion on genome 30500
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgtgtcaaat
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTTAAGGAGCACGCTTGGAAAGCGTGTGTGCGGTCAAACGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aatagtttgg
Secondary structure (Cloverleaf model)
>WENV170765189	Ser	GGA
                   t      GCCA aatagtttgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGTGCGGTCAAACGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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