The detailed information of tRNA gene sequence


Sequence ID>WENV170765221
Genome IDLWDU01035773
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 12849
End posion on genome 12760
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agttcgtcgc
tRNA gene sequence 
GGTGAGGTGGCCGAGTGGCTGAAGGCGCCGGTTTGCTAAACCGGTGAGGGGGGAACTCCT
CCCAGGGTTCGAATCCCTGCCTCACCGCCA
Downstream region at tRNA end position 
ttcatctctg
Secondary structure (Cloverleaf model)
>WENV170765221	Ser	GCT
                   c      GCCA ttcatctctg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGAGGGGGGAACTCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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