The detailed information of tRNA gene sequence


Sequence ID>WENV170765222
Genome IDLWDU01035776
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 4903
End posion on genome 4993
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgagttatac
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCGTAACGGGGGCGCCTCGAAAGCGTCTTGTCGGGTAACCGG
CACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttcatttgtt
Secondary structure (Cloverleaf model)
>WENV170765222	Ser	CGA
                   c      GCCA ttcatttgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGTCGGGTAACCGGCAC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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